Honey Attenuates Phenylhydrazine-Induced Hematotoxicity and Oxidative Stress in Male Wistar Rats

Honey is a sweet, viscous food substance produced by bees using nectar from flowers. Due to its complex chemical composition, it has been widely used in traditional medicine for its therapeutic properties. Thepresent study evaluated the protective role of honey in attenuating phenylhydrazine (PHZ)-induced toxicity in male Wistar rats. Twenty (20) male Wistar rats with a weight range of 200-250g were used for the study. They were allocated into four (4) groups consisting of five (5) rats each. In the first phase of the experiment, animals in group I (control) received distilled water while animals in groups II, III and IV received 2ml of 15, 30 and 60% honey respectively by oral gavage. In the second phase, haematotoxicity and oxidative stress were induced by intraperitoneal injection of phenylhydrazine (PHZ) at 50 mg/kg to all twenty (20) animals, daily for two (days). The animals continued to receive distilled water and honey as in phase one. Blood collected from animals was analyzed for haematological and oxidative stress parameters following standard laboratory procedures. Results from the present study show significantly increased packed cell volume, haemoglobin concentration, red blood cell, total white blood cell and neutrophil counts among the experimental groups compared to the control (p<0.05). Also, superoxide dismutase, catalase and glutathione levels increased among the honey-supplemented experimental groups compared while malondialdehyde levels reduced compared to the control (P<0.05). The study concludes that oral supplementation of honey may have protected against phenylhydrazine-induced toxicity as evidenced by increased packed cell volume, red blood cell, white blood cell and neutrophile counts, catalase and superoxide dismutase as well reduced malondialdehyde. The present evidence suggests that honey could attenuate haematotoxicity and oxidative stress caused by phenylhydrazine.

GC-FID guided Identification and Quantification of detectable Phytochemicals in selected Commercial Chamomile Herbal Tea

Background and objective: Phytochemicals are plant-based bioactive ingredients found in tea, fruits, and vegetables with multiple health benefits. This study aimed to identify and quantify the detectable phytochemicals in selected products of chamomile herbal tea (CHT) using the Gas Chromatography - Flame Ionization Detector (GC-FID) approach. Methods: Selected CHTs were coded as CHT-A to CHT-G. CHT-F was crude and unbranded however, CHT-G was an oil extract of CHT. Ethanolic extracts of CHT were analysed and quantified for their phytoconstituents using the GC-FID method. Results: Phytochemicals detected in their order of abundance in most CHTs were flavonoids > glycosides > alkaloids > steroids > anti-nutrients > saponins > tannins > resveratrol. The flavonoids comprised rutin > flavanone > flavone > anthocyanin > epicatechin > kaempferol > naringenin > proanthocyanin, etc. where the glycosides found in each CHT involved cardiac and cyanogenic glycosides. Alkaloids were highest in CHT-A as ribalinidine > spartein > lunamarin with ephedrine detected just in CHT-B, CHT-C, CHT-D, CHT-E and CHT-F. Saponins occurred in four samples mainly as sapogenin. Anti-nutrients were detected in each CHT and included the phytates and oxalates. Resveratrol was detected in three samples only. Conclusion: Most of the CHTs evaluated showed the presence of flavonoids, glycosides, alkaloids, steroids, anti-nutrients, saponins, tannins and resveratrol.

Self-expandable metallic stent-induced esophagorespiratory fistulas in patients with advanced esophageal cancer

Background/Aims@#Self-expandable metallic stents (SEMSs) are widely adopted for the palliation of dysphagia in patients with malignant esophageal strictures. An important adverse event is the development of SEMS-induced esophagorespiratory fistulas (SEMS-ERFs). This study aimed to assess the risk factors related to the development of SEMS-ERF after SEMS placement in patients with esophageal cancer. @*Methods@#This retrospective study was performed at the Instituto do Cancer do Estado de São Paulo. All patients with malignant esophageal strictures who underwent esophageal SEMS placement between 2009 and 2019 were included in the study. @*Results@#Of the 335 patients, 37 (11.0%) developed SEMS-ERF, with a median time of 129 days after SEMS placement. Stent flare of 28 mm (hazard ratio [HR], 2.05; 95% confidence interval [CI], 1.15–5.51; p=0.02) and post-stent chemotherapy (HR, 2.0; 95% CI, 1.01–4.00; p=0.05) were associated with an increased risk of developing SEMS-ERF, while lower-third tumors were a protective factor (HR, 0.5; 95% CI, 0.26–0.85; p=0.01). No difference was observed in overall survival. @*Conclusions@#The incidence of SEMS-ERFs was 11%, with a median time of 129 days after SEMS placement. Post-stent chemotherapy and a 28 mm stent flare were associated with a higher risk of SEMS-ERF.

Genetic diversity in two threatened species of guitarfish (Elasmobranchii: Rhinobatidae) from the Brazilian and Argentinian coasts: an alert for conservation

The guitarfishes Pseudobatos horkelii and Pseudobatos percellens meet the criteria for threatened status as Critically Endangered (CR) and Endangered (EN), respectively. Both species occur in the Southern Atlantic Ocean. Considering the lack of data on the genetic structure of these species, the present study evaluated the genetic variability and population structure of the P. horkelii and P. percellens in the southern region of Brazil and the northern coast of Argentina, based on sequences of mitochondrial DNA, Control Region (D-loop). Samples of P. horkelii (n = 135) were analyzed in six localities situated in Northern Argentina, along the Brazilian states' coast. The mean of nucleotide diversity was 0.0053, the ΦST was 0.4277 and demographic analysis of P. horkelii suggests the existence of stability of the populations, with D = 0.9929, FS = 2.0155, SSD = 0.0817, R = 0.2153. In P. percellens (n = 101) were analyzed from six Brazilian localities along the coast of Santa Catarina, Paraná, and São Paulo. The mean nucleotide diversity was 0.0014 and ΦST value of 0.2921, the demographic analysis indicates a high migration rate of P. percellens among the localities evaluated, with D = 0.5222, FS = 0.3528, SSD = 0.01785, R = 0.3890.(AU)

As raias violas Pseudobatos horkelii e Pseudobatos percellens, são listados como "Criticamente em Perigo" (CR) e "Em Perigo" (EN), respectivamente. Ambas as espécies ocorrem no Sul do Oceano Atlântico. Considerando a falta de dados sobre a estrutura genética dessas espécies, o presente estudo avaliou a variabilidade genética e a estrutura populacional de P. horkelii e P. percellens na região sudeste do Brasil e litoral norte da Argentina, com base em sequências de DNA mitocondrial, região de controle (D-loop). Amostras de 135 indivíduos de P. horkelii analisados em seis localidades, situadas no norte da Argentina e ao longo da costa dos estados brasileiros. A média da diversidade nucleotídica foi de 0.0053, o índice ΦST foi de 0.4277 e a análise demográfica de P. horkelii, indicou a existência de estabilidade das populações, com D = 0.9929, Fus = 2.0155, SSD = 0.0817, R = 0.2153. Em 101 exemplares de P. percellens, foram analisados em seis localidades brasileiras ao longo do litoral de Santa Catarina, Paraná e São Paulo. A diversidade nucleotídica média foi de 0.0014 e o valor ΦST de 0.2921, a análise demográfica indicou uma alta taxa de migração de P. percellens entre as localidades analisadas, com D = 0.5222, FS = 0.3528, SSD = 0.01785, R = 0.3890.(AU)

Genetic diversity assessment for the vulnerable migratory cownose ray Rhinoptera bonasus (Myliobatiformes: Rhinopteridae) from the southwestern Atlantic Ocean

ABSTRACT Rhinoptera bonasus is a bento-pelagic and highly migratory species occurring from southern United States to northern Argentina. Due to overfishing effects, R. bonasus is currently at risk, classified by the IUCN Red List as vulnerable. Considering the lack of molecular data available for R. bonasus, this study aimed to describe the genetic variability and population structure of specimens sampled from three Brazilian coast ecoregions (Amazon ecoregion, Pará; Northeastern ecoregion, Pernambuco and Southeastern ecoregion, Rio de Janeiro, São Paulo and Santa Catarina), through five polymorphic microsatellite markers. Here testing the panmixia hypothesis for Brazilian ecoregions and test natal philopathy. A total of 69 analyzed specimens revealed individual and significant genetic differentiation between the sampled locations. ST (0.12), PCA, DAPC and Bayesian analyses of the genetic population structure revealed at least two distinct genetic R. bonasus groupings. IBD tests were significant, indicating a correlation between genetic and geographical distance among populations, which can be explained by reproductive philopatric behavior. Philopatric behavior associated with R. bonasus mobility may influence the differentiation values observed for all loci in the investigated samples.

RESUMO Rhinoptera bonasus é uma espécie bento-pelágica e altamente migratória, que ocorre do sul dos Estados Unidos ao norte da Argentina. Devido aos efeitos da sobrepesca, R. bonasus está atualmente em risco, classificada pela Lista Vermelha da IUCN como vulnerável. Considerando a falta de dados moleculares disponíveis para R. bonasus, este estudo teve como objetivo descrever a variabilidade genética e estrutura populacional de espécimes amostrados em três ecorregiões do litoral brasileiro (Ecorregião Amazônica, Pará; Ecorregião Nordeste, Pernambuco e Ecorregião Sudeste, Rio de Janeiro, São Paulo e Santa Catarina), por meio de cinco marcadores microssatélites polimórficos. Assim, testaremos as hipóteses de panmixia e filopatria natal. Um total de 69 espécimes analisados revelou diferenciação genética individual e significativa entre os locais amostrados. As análises de ST (0,12), PCA, DAPC e Bayesiana revelaram pelo menos dois agrupamentos genéticos distintos de R. bonasus. Os testes de IBD foram significativos, indicando uma correlação entre a distância genética e geográfica entre as populações, o que pode ser explicado pelo comportamento filopátrico reprodutivo. O comportamento filopátrico associado à mobilidade de R. bonasus pode influenciar os valores de diferenciação observados para todos os loci nas amostras investigadas.

Aplicação de um novo software de TCFC com filtros específicos para redução de artefatos: série de casos / Application of a new CBCT software with specific filters for blooming artifact reduction: case series

Introdução: As obturações dos canais radiculares e os pinos intrarradiculares geralmente produzem artefatos de contraste branco e possíveis alterações volumétricas nas imagens de tomografia computadorizada de feixe cônico (TCFC). Esses artefatos, induzidos pela maior densidade dos materiais obturadores de canais radiculares, cimentos para colocação de coroa e pinos intracanais, podem potencialmente levar a interpretações incorretas, interferindo no diagnóstico de um volume adquirido de TCFC, principalmente na avaliação de potenciais fraturas e perfurações radiculares. Objetivos: Avaliar em seis casos clínicos os efeitos positivos e negativos dos artefatos de contraste branco no diagnóstico de fraturas radiculares, perfurações radiculares e cimentação de restaurações de porcelana. Métodos: O software e-Vol DX, que possui filtros específicos para redução de artefato de contraste (BAR, Blooming Artifact Reduction), foi usado para melhorar o valor diagnóstico dos volumes adquiridos de TCFC. Conclusões: O em- prego do software e-Vol DX para a reconstrução de imagens de TCFC melhorou a visualização das estruturas anatômicas e reduziu os artefatos. A visualização aprimorada de da- dos nas imagens pode auxiliar na identificação de detalhes essenciais que, em conjunto com os achados clínicos, são úteis para uma correta estruturação do diagnóstico (AU).

Introduction: Root canal fillings and intraradicular posts often create white contrast artifacts and possible volumetric changes on CBCT scans known as blooming artifacts. These alterations could lead to the incorrect interpretations reducing the diagnostic of an acquired CBCT volume, particularly when evaluating potential root fractures and root perforations. Methods and Results: In six clinical cases, the positive and negative effects of beam hardening artifacts on the diagnosis of root fractures, root perforations and porcelain restoration cementation were evaluated. These artifacts, induced by the higher density of root canal filling materials, cements for crown placement and intracanal posts, may potentially lead to inaccurate or false interpretations. A novel software, e-Vol DX, which has specific filters for blooming artifact reduction (BAR), was used to improve the diagnostic value of acquired CBCT volumes. Conclusions: The use of the e-Vol DX software package for the reconstruction of CBCT scans improved visualization of anatomical structures and reduced blooming artifacts. Improved data visualization may help reveal essential details that, in conjunction with clinical findings, are useful to achieve a correct diagnosis (AU).

Meta-análisis para evaluar eficiencia de selección genómica en cereales: Meta-analysis for evaluating the efficiency of genomic selection in cereals

La selección genómica (SG) es usada para predecir el mérito de un genotipo respecto a un carácter cuantitativo a partir de datos moleculares o genómicos. Estadísticamente, la SG requiere ajustar un modelo de regresión con múltiples variables predictoras asociadas a los estados de los marcadores moleculares (MM). El modelo se calibra en una población en la que hay datos fenotípicos y genómicos. La abundancia y la correlación de la información de los MM dificultan la estimación, y por ello existen distintas estrategias para el ajuste del modelo basadas en: mejor predictor lineal insesgado (BLUP), regresiones Bayesianas y aprendizaje automático. La correlación entre el fenotipo observado y el mérito genético predicho por el modelo ajustado, provee una medida de eficiencia (capacidad predictiva) de la SG. El objetivo de este trabajo fue realizar un meta-análisis de la eficiencia de la SG en cereales. Se realizó una revisión sistemática de estudios relacionados a SG y se llevó a cabo un meta-análisis, para obtener una medida global de la eficiencia de la SG en trigo y maíz, bajo diferentes escenarios (cantidad de MM y método estadístico usado para la SG). El metaanálisis indicó un coeficiente de correlación promedio de 0,61 entre los méritos genéticos predichos y los fenotipos observados. No se observaron diferencias significativas en la eficiencia de la SG realizada con modelos basados en BLUP (RR-BLUP y GBLUP), enfoque estadístico más comúnmente usado. El incremento de MM no cambia significativamente la eficiencia de la SG.

Genomic selection (GS) is used to predict the merit of a genotype with respect to a quantitative trait from molecular or genomic data. Statistically, GS requires fitting a regression model with multiple predictors associated with the molecular markers (MM) states. The model is calibrated in a population with phenotypic and genomic data. The abundance and correlation of MM information make model estimation challenging. For that reason there are diverse strategies to adjust the model: based on best linear unbiased predictors (BLUP), Bayesian regressions and machine learning methods. The correlation between the observed phenotype and the predicted genetic merit by the fitted model provides a measure of the efficiency (predictive ability) of the GS. The objective of this work was to perform a metaanalysis on the efficiency of GS in cereals. A systematic review of related GS studies and a meta-analysis, in wheat and maize, was carried out to obtain a global measure of GS efficiency under different scenarios (MM quantity and statistical models used in GS). The meta-analysis indicated an average correlation coefficient of 0.61 between observed and predicted genetic merits. There were no significant differences in the efficiency of the GS based on BLUP (RR-BLUP and GBLUP), the most common statistical approach. The increase of MM data, make GS efficiency do not vary widely.

Genetic diversity and aquaculture conservation for a threatened Neotropical catfish

Due to the ecological importance of Lophiosilurus alexandri, the present work evaluated its genetic representativeness by comparing wild stocks to broodstocks that were kept at three restocking hatcheries along the São Francisco River. A total of 97 samples were genotyped for newly developed microsatellite markers. Low levels of genetic diversity (average alleles number of 4.2 alleles) were detected in all cases, being more severe in captive groups. Significant pairwise FST and DEST values, Structure, and DAPC analyses showed that wild animals were structured in two groups, and a third group was formed by captive animals, evidencing the need to adopt genetic criteria to retain genetic diversity in the hatcheries. For this reason, three full-sib families were constructed to select the best relatedness estimator for L. alexandri and establish a cut-off value aimed to avoid full-sibling matings in the hatcheries. Two estimators, Wang (RW) and Lynch & Li (RLL), were accurate in reflecting the relatedness level for full-sibs in this species. According to them, less than 50% of the potential breeding matings in the three hatcheries are advisable. The innate low diversity of L. alexandri highlights the importance of minimizing inbreeding and retaining genetic diversity towards the species recovery.(AU)

Devido à importância ecológica de Lophiosilurus alexandri, o presente trabalho avaliou sua representatividade genética, comparando estoques selvagens com plantéis de reprodutores de três larviculturas ao longo do Rio São Francisco. Noventa e sete amostras foram genotipadas com marcadores microssatélites recém-desenvolvidos. Baixos níveis de diversidade genética (número médio de alelos de 4,2) foram detectados em todos os casos, sendo mais severo no cativeiro. Os valores de FST e DEST par a par, as análises do Structure e DAPC mostraram a estruturação dos animais selvagens em dois grupos, e um terceiro formado pelas larviculturas, evidenciando a necessidade de adoção de critérios genéticos para retenção da diversidade genética no cativeiro. Por essa razão, três famílias de irmãos completos foram construídas para selecionar o melhor estimador de parentesco para a espécie e estabelecer os valores mínimos de corte para evitar cruzamentos indesejados. Dois estimadores, Wang (RW) e Lynch & Li (RLL), foram eficientes em refletir as relações de parentesco para irmãos completos nessa espécie. Segundo eles, menos de 50% dos potenciais cruzamentos são recomendáveis nas três larviculturas. A baixa diversidade genética inerente ao L. alexandri destaca a importância de minimizar a consanguinidade e evitar perda de diversidade genética, visando a recuperação da espécie.(AU)

DNA barcoding for molecular identification of Gynerium sagittatum(Poales: Poaceae): genetic diversity in savannah genotypes from Córdoba, Colombia

Introduction: The fiber of the Gynerium sagittatum Aubl. P. Beauv is raw material for the elaboration of several handcrafts, which are symbols of Colombian cultural identity. In the manufacture process, different genotypes are used according to the fiber quality and the type of craftsmanship, but it is believed that Gynerium is a complex species, and to date, there is no agreement on whether these genotypes belong to the same species or to different species. Objective: The aim of this study was to quickly and accurately identify wild cane plants using the nuclear ribosomal internal transcribed spacer (ITS1+ITS2), three chloroplast regions (matK, rbcL, ycf1), and their combinations. Methods: Different tests were used for discrimination: (1) inter and intraspecific distances, (2) Best Match (BM), Best Close Match (BCM), and tree-based method (3) Neighbor Joining (NJ) and (4) maximum likelihood and bayesian inference in molecular data. Results: The results showed that BM and BCM approaches revealed the low rate of correct species identification for ITS+matK (33.3 %) and ITS (28.6 %) loci, showing similarity among sequences. These results were further supported by tree-based analyses, where all individual regions and the different gene combinations had a zero discrimination rate. Conclusions: all genotypes belong to the same species of wild cane, therefore existing morphological differences can be related to phenotypic plasticity.

Introducción: La fibra de Gynerium sagittatum Aubl. P. Beauv, es materia prima esencial para la elaboración de varias artesanías, que son símbolos de la identidad cultural colombiana. En el proceso de fabricación, se utilizan diferentes genotipos de acuerdo con la calidad de la fibra y el tipo de artesanía, pero se cree que Gynerium es una especie compleja y hasta la fecha, no hay un consenso sobre si estos genotipos pertenecen a la misma especie o especies diferentes. Objetivo: Identificar de forma rápida y precisa plantas de caña silvestre utilizando el espaciador transcrito interno ribosomal nuclear (ITS1+ITS2), tres regiones de cloroplasto (matK, rbcL, ycf1) y sus combinaciones. Métodos: Se utilizaron diferentes pruebas para la discriminación: (1) distancias inter e intraespecíficas, (2) Prueba Best Match (BM), Best Close Match (BCM) y método basado en árboles (3) Neighbor Joining (NJ) y (4) Probabilidad de inferencia bayesiana mediante datos moleculares. Resultados: Los resultadosmostraron que los enfoques BM y BCM revelaron una baja tasa de identificación correcta de especies para los loci ITS+matK (33.3 %) e ITS (28.6 %), mostrando similitud entre las secuencias. Estos resultados fueron respaldados por análisis basados en árboles, donde todas las regiones individuales y las diferentes combinaciones de genes tuvieron una tasa de discriminación de cero (0 %). Conclusiones: los genotipos evaluados pertenecen a la misma especie de caña flecha y las diferencias morfológicas existentes pueden estar relacionadas con plasticidad fenotípica.

Rastreabilidade em medicina laboratorial: um estímulo global para resultados exatos no cuidado com o paciente

RESUMO Os resultados da medicina laboratorial influenciam uma alta porcentagem das decisões tomadas pelos médicos. A globalização requer que os resultados obtidos por métodos diferentes sejam concordantes, garantindo a segurança do paciente. É necessário haver colaboração internacional para difundir essa exigência. Essa colaboração deve basear-se na rastreabilidade da medicina laboratorial, bem como na adoção de procedimentos de medição e materiais de referência de alta hierarquia metrológica e que sejam comutáveis internacionalmente. A aplicação da cadeia de rastreabilidade metrológica facilita essa abordagem universal. A quantificação de colesterol no soro e Hemoglobina sanguínea A1c (HbA1c) no sangue serve como exemplo do processo de padronização de métodos com impacto demonstrado nos resultados clínicos. Por outro lado, a quantificação de paratormônio (PTH) e hemoglobina A2 (HbA2) no sangue revela a variabilidade entre os métodos atualmente em uso, que compromete o tratamento do paciente e demanda, portanto, a harmonização e/ou padronização dos métodos. Os desafios à difusão da rastreabilidade em medicina laboratorial incluem fatores como disponibilidade de materiais e métodos de referência, diferenças geográficas, uso de unidades de medida variadas, ensaios de analitos complexos e coordenação mundial limitada. Uma colaboração abrangente requer o envolvimento das partes interessadas no âmbito mundial, desde especialistas gerais a aqueles com particular experiência em medicina laboratorial, com vivência em laboratórios clínicos de rotina. Um plano de coordenação é apresentado neste artigo com ações atribuídas a cada um dos envolvidos.

ABSTRACT Laboratory medicine results influence a high percentage of all clinical decisions. Globalization requires that laboratory medicine results should be transferable between methods in the interests of patient safety. International collaboration is necessary to deliver this requirement. That collaboration should be based on traceability in laboratory medicine and the adoption of higher order international commutable reference materials and measurement procedures. Application of the metrological traceability chain facilitates a universal approach. The measurement of serum cholesterol and blood HbA1c serve as examples of the process of method standardization where an impact on clinical outcomes is demonstrable. The measurement of plasma parathyroid hormone and blood HbA2 serve as examples where the current between method variability is compromising patient management and method standardization and/or harmonization is required. Challenges to the widespread adoption of traceability in laboratory medicine include the availability of reference materials and methods; geographical differences; the use of variable units; complex analytes and limited global coordination. The global collaboration requires the involvement of several different stakeholder groups ranging from international experts to laboratory medicine specialists in routine clinical laboratories. A coordinated action plan is presented with actions attributable to each of these stakeholder groups.

Prueba de interacción en el análisis molecular de varianza / Test of interaction in the analysis of molecular variance

La diversidad genómica, expresada en las diferencias entre haplotipos moleculares de un conjunto de individuos, puede dividirse en componentes de variabilidad entre y dentro de algún factor de clasificación de los individuos. Para tal partición de varianzas, se usa análisis molecular de la varianza (AMOVA), el cual se construye a partir de las distancias multivariadas entre pares de haplotipos. El AMOVA clásico permite evaluar la significancia estadística de dos o más factores jerárquicos y consecuentemente no existe prueba de interacción entre factores. Sin embargo, existen situaciones donde los factores que clasifican a los individuos están cruzados y no anidados, es decir todos los niveles de un factor se encuentran representados en cada nivel del otro factor. Este trabajo propone una prueba estadística para evaluar la interacción entre factores cruzados en un AMOVA No-Jerárquico. La hipótesis nula de interacción establece que las diferencias moleculares entre individuos de distintos niveles de un factor son las mismas para todos los niveles del otro factor que los clasifica. La propuesta de análisis de interacción de factores a partir de distancias en un AMOVA No-Jerárquico comprende: cálculo de la matriz de distancia y partición de la misma en bloques, posterior cálculo de residuos y análisis de varianza no-paramétrico sobre los residuos. Su implementación es ilustrada en escenarios simulados y real. Los resultados sugieren que la prueba de interacción propuesta para el AMOVA No- Jerárquico presenta alta potencia.

The genomic diversity, expressed in the differences between molecular haplotypes of a group of individuals, can be divided into components of variability between and within some factor of classification of the individuals. For such variance partitioning, molecular analysis of variance (AMOVA) is used, which is constructed from the multivariate distances between pairs of haplotypes. The classical AMOVA allows the evaluation of the statistical significance of two or more hierarchical factors and consequently there is no interaction test between factors. However, there are situations where the factors that classify individuals are crossed rather than nested, that is, all the levels of a factor are represented in each level of the other one. This paper proposes a statistical test to evaluate the interaction between crossed factors in a Non-Hierarchical AMOVA. The null hypothesis of interaction establishes that the molecular differences between individuals of different levels of a factor are the same for all the levels of the other factor that classifies them. The proposed analysis of interaction in a Non- Hierarchical AMOVA includes: calculation of the distance matrix and partition of it into blocks, subsequent calculation of residuals and analysis of non-parametric variance on the residuals. Its implementation is illustrated in simulated and real scenarios. The results suggest that the proposed interaction test for the Non-Hierarchical AMOVA presents high power.

Control de falsos descubrimientos en mapeo asociativo con poblaciones estructuradas / False discovery rate control in association mapping with genetically structured populations

Las pruebas de asociación entre marcadores moleculares y variables fenotípicas son cruciales para la identificación de QTL (Quantitative Trait Loci). Los avances biotecnológicos incrementaron la disponibilidad de marcadores genéticos y consecuentemente el número de pruebas de la asociación fenotipo-genotipo. El incremento de pruebas de significancia estadística a realizar en simultaneo (multiplicidad) demanda correcciones de los valores-p obtenidos para cada prueba de hipótesis de manera de mantener acotada las tasas de error para la familia de pruebas de asociación. Las correcciones estadísticas clásicas para el problema de multiplicidad, como Bonferroni, el método de control de la tasa de falsos descubrimientos (FDR) y el número efectivo de pruebas (Meff), son ampliamente usadas, pero fueron desarrolladas para datos independientes. Sin embargo, cuando las poblaciones de mapeo están genéticamente estructuradas los datos dejan de ser independientes. En este trabajo, proponemos un método de corrección por multiplicidad basado en estimación del número efectivo de pruebas desde un modelo que ajusta por la estructura de correlación subyacente. Se evalúa el desempeño del procedimiento propuesto a través del análisis de los valores-p obtenidos para un conjunto de QTL simulados. Los resultados sugieren que el método propuesto provee control de la tasa de falsos positivos y presenta mayor potencia que otros métodos de corrección por multiplicidad usados en mapeo asociativo.

The association tests between molecular markers and phenotypic traits are crucial for the Quantitative Trait Loci (QTL) identification. Biotechnological advances increased the molecular marker information; consequently, the number of genotype-phenotype association tests required incremented too. The multiple statistical inferences (multiplicity) demand corrections of the p-values obtained for each comparison in order to keep limited the error rates for the family of association tests. However, classic statistical correction methods such as Bonferroni, False Discovery Rate (FDR) and the Effective Number of Independent Test (Meff) were developed in the context of independent data. Wherever, when the population genetic structure is present, the data are no longer independent. In this paper, we propose a method of correction for multiplicity based on estimation of the effective number of tests from a model that adjust for the underlying correlation structure. We evaluate the performance of the proposed procedure in the estimation of p-values for a set of simulated QTL. The results suggest that the proposed method provides control of FDR and has more power than other methods for multiplicity correction used in association mapping.

Kidney injury and other complications related to colonoscopy in inpatients at a tertiary teaching hospital

OBJECTIVES: To describe clinical complications related to colonoscopy in inpatients with multiple diseases. Among the known complications, acute kidney injury was the primary focus. METHODS: This was an observational retrospective study of 97 inpatients. Data relating to age; gender; comorbidities; current medication; blood tests (renal function, blood glucose and LDL cholesterol levels); length of hospital stay; indication, results, and complications of colonoscopies; and time to the development of kidney injury were collected between June 2011 to February 2012. RESULTS: A total of 108 colonoscopies (9 screening and 88 diagnostic) were conducted in 97 patients. Renal injury occurred in 41.2% of the patients. The univariate analysis revealed that kidney injury was related to the use of diuretics, statins, calcium channel blockers, and angiotensin converting enzyme inhibitor; however, the multivariate analysis showed that only the use of diuretics was associated with kidney injury. The occurrence of kidney injury and the time to its development were independent of the previous glomerular filtration rate as calculated with the Chronic Kidney Disease Epidemiology Collaboration (CKD-EPI) equation. CONCLUSIONS: The use of diuretics was the only independent variable associated with the development of kidney injury in inpatients with multiple comorbidities who underwent colonoscopy. The occurrence of kidney injury and the time to its development were independent of previous CKD-EPI-based assessments of renal function. These results highlight the increased risk of colonoscopy in such patients, and its indication should be balanced strictly and perhaps avoided as a screening test.

Palisadegrass effects on N fertilizer dynamic in intercropping systems with corn

ABSTRACT Corn grain yield, nitrogen (N) fertilizer efficiency and distribution to corn alone and three forms of corn and palisadegrass (Urochloa spp.) intercropping implantation was investigated. A field experiment with 15N labeling fertilizer was performed in randomized block design. No form of palisadegrass intercropping implantation affected corn grain yield, total N accumulation and N use efficiency (NUE), which were 8.7 t ha-1, 205 kg ha-1 and 37% respectively. The palisadegrass produced on average 1.9 t of dry mass, absorbing a maximum of 6 kg ha-1 or 5.5% of N fertilizer during corn growing. Furthermore, the palisadegrass did not affect N fertilizer distribution in soil-plant system, in which 28.2% was recovered in the soil and 40.4% in the plants (corn + palisadegrass). The results show that for the three intercropping implantation methods the palisadegrass did not compete with corn for N fertilizer.

Hypothalamic endoplasmic reticulum stress of overtrained mice after recovery

Abstract AIMS knowing the relationship between endoplasmic reticulum (ER) stress and inflammation and based on the fact that downhill running-based overtraining (OT) model increases hypothalamus levels of some pro-inflammatory cytokines, we verified the effects of three OT protocols on the levels of BiP, pIRE-1 (Ser734), pPERK (Thr981), pelF2alpha (Ser52), ATF-6 and GRP-94 proteins in the mouse hypothalamus after two weeks of recovery. METHODS the mice were randomized into control (CT), overtrained by downhill running (OTR/down), overtrained by uphill running (OTR/up) and overtrained by running without inclination (OTR) groups. After 2-week total recovery period (i.e., week 10), hypothalamus was removed and used for immunoblotting. RESULTS the OTR/down group exhibited high levels of BiP and ATF6. The other OT protocols showed higher levels of pPERK (Th981) and pelf-2alpha (Ser52) when compared with the CT group. CONCLUSION the current results suggest that after a 2-week total recovery period, the overtrained groups increased partially their ER stress protein levels, but without hypothalamic inflammation, which characterizes a physiological condition related to an adaptation mechanism.(AU)

Nonfunctional overreaching and hepatic adaptations of APPL1 and APPL2

Abstract AIMS Previously, we verified that overtrained mice upregulated the TRB3 levels, its association with Akt, and the hepatic concentrations of glycogen. It is known that APPL1 can limit the interaction between TRB3 and Akt, playing an important role in the glucose homeostasis. Thus, we verified the effects of three overtraining protocols on the hepatic levels of APPL1 and APPL2. METHODS Rodents were divided into control (CT), overtrained by downhill running (OTR/down), overtrained by uphill running (OTR/up) and overtrained by running without inclination (OTR). The hepatic contents of APPL1 and APPl2 were measured by the immunoblotting technique. RESULTS Significant elevation of APPL1 observed in the OTR/down and OTR/up groups, as well as the tendency of increase (p=0.071) observed in the OTR group. CONCLUSION These results indicate that this particular protein is likely to participate in the glucose homeostasis previously observed in response to these OT protocols.(AU)

Anatomical and radiographic study of the white-eared opossum (Didelphis albiventris) skull / Estudo anatômico e radiográfico do crânio no gambá-de-orelha-branca (Didelphis albiventris)

This study was made to investigate the anatomical features of the white-eared opossum skull, by osteology and radiographic anatomy. For this, five animals were used without sexual distinction. The skull was examined by radiographic and macroscopic characteristics. The skulls were then subjected to maceration. The skull was described macroscopically according to standard views, i.e. dorsal and caudal, lateral, ventral, and midsagittal. The skull can be divided into facial (viscerocranium) and cranial (neurocranium) regions. The facial region was elongated and more developed than neurocranium. The supraorbital foramen was absent. The tympanic bulla is not well developed. The zygomatic arch was formed by zygomatic process of the temporal bone, zygomatic process of the maxilla, and temporal process of the zygomatic bone. There was no significant difference between bones found in this study when compared with those described for others mammals. These findings may contribute to the better understanding of the anatomy and biology of the white-eared opossum.(AU)

Este estudo objetivou investigar as características anatômicas do crânio do gambá-de-orelha-branca, através da anatomia óssea e radiográfica. Para tanto, cinco animais foram usados sem distinção sexual. O crânio foi estudado através de análises radiográficas e macroscópicas. Para esta última, os crânios foram macerados. O crânio foi descrito macroscopicamente de acordo com as vistas ou normas rotineiras, isto é, dorsal e caudal, lateral, ventral e sagital. O crânio pode ser dividido em regiões facial (viscerocrânio) e cranial (neurocrânio). A região facial se mostrou alongada e mais desenvolvida que o neurocrânio. O forame supraorbital estava ausente. A bula timpânica não era bem desenvolvida. O arco zigomático era formado pelo processo zigomático do osso temporal, processo zigomático da maxila, e pelo processo temporal do osso zigomático. Não houve diferenças significativas entre os ossos estudados quando comparados com os já descritos para outros mamíferos. Estes resultados podem contribuir com um melhor entendimento da anatomia e biologia deste animal.(AU)